ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3qsmB2 - ECOD Domain | ECOD

ECOD/Domains/e3qsmB2

e3qsmB2

UID: 000420887

PDB

Range: B:1-217,B:322-387
PDB: 3QSM chain B(all domains)
UniProt: P40859 (all domains)
Gene: soxA

Molecule: Monomeric sarcosine oxidase

3D Structure

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Related Domains

Browse other domains in FAD dependent oxidoreductase / FAD binding domain →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupFAD/NAD(P)-binding domain(2003.1.2)

FFamilyFAD dependent oxidoreductase / FAD binding domain(2003.1.2.13)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
Chloride ionCL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

FAD dependent oxidoreductase

ClanCL0063NADP_Rossmann

PF01494FAD_binding_3

FAD binding domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 3QSM RCSB PDB: 3QSM PDBe: 3QSM UniProt: P40859

Downloads

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