ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q5PKU1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5PKU1_nD1

Q5PKU1_nD1

UID: 004209855

AlphaFold

Range: 6-120
AlphaFold: AF-Q5PKU1
UniProt: Q5PKU1 (all domains)

3D Structure

Loading viewer...

Related Domains

Browse other domains in TrmE_N →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAminomethyltransferase folate-binding domain(304.107)

TT-groupAminomethyltransferase folate-binding domain(304.107.1)

FFamilyTrmE_N(304.107.1.3)

Pfam Families

GTP-binding protein TrmE N-terminus

ClanCL0289FBD

External Links

AlphaFold DB: Q5PKU1 UniProt: Q5PKU1

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-120