ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q8F5J7_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8F5J7_nD1

Q8F5J7_nD1

UID: 004211076

AlphaFold

Range: 6-50,76-140
AlphaFold: AF-Q8F5J7
UniProt: Q8F5J7 (all domains)
Gene: ybeY

Protein: Endoribonuclease YbeY (EC 3.1.-.-)

3D Structure

Loading viewer...

Related Domains

Browse other domains in YbeY →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyYbeY(2498.1.1.22)

Pfam Families

Endoribonuclease YbeY

ClanCL0126Peptidase_MA

External Links

AlphaFold DB: Q8F5J7 UniProt: Q8F5J7

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-50,76-140