ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3naiC1 - ECOD Domain | ECOD

ECOD/Domains/e3naiC1

e3naiC1

UID: 000421253

PDB

Range: C:385-492
PDB: 3NAI chain C(all domains)
UniProt: Q80J95 (all domains)
Gene: ORF1

Molecule: RNA dependent RNA polymerase

3D Structure

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Related Domains

Browse other domains in RdRP_1 →

Classification

AArchitecturealpha bundles(a.7)

XX-grouphelical bundle domain in reverse transcriptase-like polymerases(4967)

HH-grouphelical bundle domain in reverse transcriptase-like polymerases(4967.1)

TT-grouphelical bundle domain in reverse transcriptase-like polymerases(4967.1.1)

FFamilyRdRP_1(4967.1.1.2)

Ligands

in contact, ≤ 4 Å

FluorouracilURF
drugDrugBank DB00544

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

Viral RNA-dependent RNA polymerase

ClanCL0027RdRP

External Links

ECOD PDB View: 3NAI RCSB PDB: 3NAI PDBe: 3NAI UniProt: Q80J95

Downloads

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Drug annotations from DrugDomain.