ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3pn3B1 - ECOD Domain | ECOD

ECOD/Domains/e3pn3B1

e3pn3B1

UID: 000421338

PDB

Range: B:1-181
PDB: 3PN3 chain B(all domains)
UniProt: Q9FUZ2 (all domains)
Gene: PDF1B

Molecule: Peptide deformylase 1B, chloroplastic

3D Structure

Loading viewer...

Related Domains

Browse other domains in Pep_deformylase →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupPeptide deformylase(289)

HH-groupPeptide deformylase(289.1)

TT-groupPeptide deformylase(289.1.1)

FFamilyPep_deformylase(289.1.1.1)

Ligands

in contact, ≤ 4 Å

tert-butyl {(2S)-1-[formyl(hydroxy)amino]-3-phenylpropan-2-yl}carbamatePN3
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01327Pep_deformylase

Polypeptide deformylase

External Links

ECOD PDB View: 3PN3 RCSB PDB: 3PN3 PDBe: 3PN3 UniProt: Q9FUZ2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure