ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2bfgH1 - ECOD Domain | ECOD

ECOD/Domains/e2bfgH1

e2bfgH1

UID: 000042137

PDB

Range: H:4-13,H:361-502
PDB: 2BFG chain H(all domains)
UniProt: Q9ZFM2 (all domains)
Gene: xynB

Molecule: BETA-XYLOSIDASE

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_39 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupGlycosyl hydrolase domain-like(12)

HH-groupGlycosyl hydrolase domain(12.1)

TT-groupGlycosyl hydrolase domain(12.1.1)

FFamilyGlyco_hydro_39(12.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01229Glyco_hydro_39

Glycosyl hydrolases family 39

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 2BFG RCSB PDB: 2BFG PDBe: 2BFG UniProt: Q9ZFM2

Downloads

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