ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3po4A3 - ECOD Domain | ECOD

ECOD/Domains/e3po4A3

e3po4A3

UID: 000422014

PDB

Range: A:601-624,A:745-832
PDB: 3PO4 chain A(all domains)
UniProt: P19821 (all domains)
Gene: polA

Molecule: DNA polymerase I

3D Structure

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Related Domains

Browse other domains in DNA_pol_A →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyDNA_pol_A(304.48.1.6)

Ligands

in contact, ≤ 4 Å

2',3'-Dideoxyadenosine triphosphateDDS
drugDrugBank DB02189
Magnesium ionMG
metal

+ 1 additive (Glycerin)

Pfam Families

PF00476DNA_pol_A

DNA polymerase family A

External Links

ECOD PDB View: 3PO4 RCSB PDB: 3PO4 PDBe: 3PO4 UniProt: P19821

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

GlycerinGOL

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.