ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3rt5X1 - ECOD Domain | ECOD

ECOD/Domains/e3rt5X1

e3rt5X1

UID: 000422296

PDB

Range: X:1-129
PDB: 3RT5 chain X(all domains)
UniProt: P00698 (all domains)
Gene: LYZ

Molecule: Lysozyme C

3D Structure

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Related Domains

Browse other domains in Lys →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupLysozyme-like(235)

HH-groupLysozyme-like(235.1)

TT-groupLysozyme-like(235.1.1)

FFamilyLys(235.1.1.1)

Ligands

in contact, ≤ 4 Å

Propyl alcoholPOL
drugDrugBank DB03175
Chloride ionCL
Sodium ionNA
metal

Pfam Families

C-type lysozyme/alpha-lactalbumin family

ClanCL0037Lysozyme

External Links

ECOD PDB View: 3RT5 RCSB PDB: 3RT5 PDBe: 3RT5 UniProt: P00698

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 2 additives (Acetate, Isopropyl alcohol)

AcetateACT
DrugBank DB14511
Isopropyl alcoholIPA
DrugBank DB02325

Shown in the structure viewer. Drug annotations from DrugDomain.