ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5VXU9_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q5VXU9_nD3

Q5VXU9_nD3

UID: 004223715

RepresentativeAlphaFold

Range: 871-1030
AlphaFold: AF-Q5VXU9
UniProt: Q5VXU9 (all domains)
Gene: SHOC1

Protein: Protein shortage in chiasmata 1 ortholog (EC 3.6.-.-) (Protein ZIP2 homolog) (MZIP2)

3D Structure

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Related Domains

Browse other domains in SHOC1_PDDEXK →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupRestriction endonuclease-like(2008.1)

TT-groupRestriction endonuclease-like(2008.1.1)

FFamilySHOC1_PDDEXK(2008.1.1.156)

Pfam Families

PF29906SHOC1_PDDEXK

SHOC1 PDDEXK domain

ClanCL0236PDDEXK

External Links

AlphaFold DB: Q5VXU9 UniProt: Q5VXU9

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 871-1030