ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1jz8D4 - ECOD Domain | ECOD

ECOD/Domains/e1jz8D4

e1jz8D4

UID: 000042263

PDB

Range: D:731-1023
PDB: 1JZ8 chain D(all domains)
UniProt: P00722 (all domains)
Gene: lacZ

Molecule: Beta-Galactosidase

3D Structure

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Related Domains

Browse other domains in Bgal_small_N →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupGlycosyl hydrolase domain-like(12)

HH-groupsupersandwich(12.3)

TT-groupsupersandwich(12.3.1)

FFamilyBgal_small_N(12.3.1.6)

Ligands

in contact, ≤ 4 Å

Beta-D-GlucoseBGC
drugDrugBank DB02379within 5 Å only
Magnesium ionMG
metal
Sodium ion

Pfam Families

PF02929Bgal_small_N

Beta galactosidase small chain

ClanCL0103Gal_mutarotase

External Links

ECOD PDB View: 1JZ8 RCSB PDB: 1JZ8 PDBe: 1JZ8 UniProt: P00722

Downloads

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metal

+ 1 additive (Dimethyl sulfoxide)

Dimethyl sulfoxideDMS

Shown in the structure viewer. Drug annotations from DrugDomain.