ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2yhoF1 - ECOD Domain | ECOD

ECOD/Domains/e2yhoF1

e2yhoF1

UID: 000423379

PDB

Range: F:-1-147
PDB: 2YHO chain F(all domains)
UniProt: P51668 (all domains)
Gene: UBE2D1

Molecule: UBIQUITIN-CONJUGATING ENZYME E2 D1

3D Structure

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Related Domains

Browse other domains in UQ_con →

Classification

AArchitecturea+b two layers(a.11)

XX-groupUBC-like(216)

HH-groupUBC-like(216.1)

TT-groupUBC-like(216.1.1)

FFamilyUQ_con(216.1.1.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Ubiquitin-conjugating enzyme

ClanCL0208UBC

External Links

ECOD PDB View: 2YHO RCSB PDB: 2YHO PDBe: 2YHO UniProt: P51668

Downloads

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