ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1kqfC1 - ECOD Domain | ECOD

ECOD/Domains/e1kqfC1

e1kqfC1

UID: 000004236

RepresentativePDB

Range: C:2-217
PDB: 1KQF chain C(all domains)
UniProt: P0AEK7 (all domains)
Gene: fdnI

Molecule: FORMATE DEHYDROGENASE, NITRATE-INDUCIBLE, CYTOCHROME B556(FDN) SUBUNIT

3D Structure

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Related Domains

Browse other domains in Ni_hydr_CYTB →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTransmembrane heme-binding four-helical bundle(5069)

HH-groupTransmembrane heme-binding four-helical bundle(5069.1)

TT-groupTransmembrane di-heme cytochromes(5069.1.1)

FFamilyNi_hydr_CYTB(5069.1.1.2)

Ligands

in contact, ≤ 4 Å

Tetrastearoyl cardiolipinCDL
drugDrugBank DB03429
FerrohemeHEM
drugDrugBank DB18267

Shown in the structure viewer.

Pfam Families

PF01292Ni_hydr_CYTB

Prokaryotic cytochrome b561

ClanCL03282heme_cytochrom

External Links

ECOD PDB View: 1KQF RCSB PDB: 1KQF PDBe: 1KQF UniProt: P0AEK7

Downloads

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Drug annotations from DrugDomain.