ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3qtkD1 - ECOD Domain | ECOD

ECOD/Domains/e3qtkD1

e3qtkD1

UID: 000424990

PDB

Range: D:6-100
PDB: 3QTK chain D(all domains)
UniProt: P15692 (all domains)
Gene: VEGFA

Molecule: Vascular endothelial growth factor A

3D Structure

Loading viewer...

Related Domains

Browse other domains in PDGF →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupCystine-knot cytokines(385)

HH-groupCystine-knot cytokines(385.1)

TT-groupCystine-knot cytokines(385.1.1)

FFamilyPDGF(385.1.1.5)

Ligands

in contact, ≤ 4 Å

trifluoroacetic acidTFA

+ 2 additives (Acetate, Glycerin)

AcetateACT
DrugBank DB14511
GlycerinGOL

Pfam Families

PDGF/VEGF domain

ClanCL0079Cystine-knot

External Links

ECOD PDB View: 3QTK RCSB PDB: 3QTK PDBe: 3QTK UniProt: P15692

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.