ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3sz8B1 - ECOD Domain | ECOD

ECOD/Domains/e3sz8B1

e3sz8B1

UID: 000426896

PDB

Range: B:0-279
PDB: 3SZ8 chain B(all domains)
UniProt: Q3JP68 (all domains)
Gene: kdsA

Molecule: 2-dehydro-3-deoxyphosphooctonate aldolase 2

3D Structure

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Related Domains

Browse other domains in DAHP_synth_1 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyDAHP_synth_1(2002.1.1.35)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00793DAHP_synth_1

DAHP synthetase I family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 3SZ8 RCSB PDB: 3SZ8 PDBe: 3SZ8 UniProt: Q3JP68

Downloads

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