ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3rl6B1 - ECOD Domain | ECOD

ECOD/Domains/e3rl6B1

e3rl6B1

UID: 000427161

PDB

Range: B:1-294
PDB: 3RL6 chain B(all domains)
UniProt: Q9V228 (all domains)
Gene: asnS-like

Molecule: Archaeal asparagine synthetase A

3D Structure

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Related Domains

Browse other domains in tRNA-synt_2 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupClass II aaRS and biotin synthetases(314)

HH-groupClass II aaRS and biotin synthetases(314.1)

TT-groupClass II aaRS and biotin synthetases(314.1.1)

FFamilytRNA-synt_2(314.1.1.1)

Ligands

in contact, ≤ 4 Å

Adenosine phosphateAMP
drugDrugBank DB00131
AsparagineASN

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00152tRNA-synt_2

tRNA synthetases class II (D, K and N)

ClanCL0040tRNA_synt_II

External Links

ECOD PDB View: 3RL6 RCSB PDB: 3RL6 PDBe: 3RL6 UniProt: Q9V228

Downloads

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