ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3s28F2 - ECOD Domain | ECOD

ECOD/Domains/e3s28F2

e3s28F2

UID: 000427715

PDB

Range: F:532-807
PDB: 3S28 chain F(all domains)
UniProt: P49040 (all domains)
Gene: SUS1

Molecule: Sucrose synthase 1

3D Structure

Loading viewer...

Related Domains

Browse other domains in Glycos_transf_1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512)

HH-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1)

TT-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1.1)

FFamilyGlycos_transf_1(7512.1.1.3)

Ligands

in contact, ≤ 4 Å

Malonic acidMLA
drugDrugBank DB02175
Uridine-5'-DiphosphateUDP
drugDrugBank DB03435
1,5-anhydro-D-arabino-hex-1-enitol

Pfam Families

PF00534Glycos_transf_1

Glycosyl transferases group 1

ClanCL0113GT-B

External Links

ECOD PDB View: 3S28 RCSB PDB: 3S28 PDBe: 3S28 UniProt: P49040

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

1,5-anhydro-D-fructoseNHF

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.