ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3t88B1 - ECOD Domain | ECOD

ECOD/Domains/e3t88B1

e3t88B1

UID: 000427865

PDB

Range: B:5-285
PDB: 3T88 chain B(all domains)
UniProt: P0ABU0 (all domains)
Gene: menB

Molecule: 1,4-Dihydroxy-2-naphthoyl-CoA synthase

3D Structure

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Related Domains

Browse other domains in ECH_1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupClpP/crotonase(2486)

HH-groupClpP/crotonase(2486.1)

TT-groupClpP/crotonase(2486.1.1)

FFamilyECH_1(2486.1.1.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
o-succinylbenzoyl-N-coenzyme AS0N

+ 2 additives (Glycerin, Triethylene glycol)

GlycerinGOL

Pfam Families

Enoyl-CoA hydratase/isomerase

ClanCL0127ClpP_crotonase

External Links

ECOD PDB View: 3T88 RCSB PDB: 3T88 PDBe: 3T88 UniProt: P0ABU0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Triethylene glycolPGE

DrugBank DB02327

Shown in the structure viewer. Drug annotations from DrugDomain.