ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2ycmA1 - ECOD Domain | ECOD

ECOD/Domains/e2ycmA1

e2ycmA1

UID: 000427966

PDB

Range: A:76-300
PDB: 2YCM chain A(all domains)
UniProt: P69834 (all domains)
Gene: ISPD

Molecule: 2-C-METHYL-D-ERYTHRITOL 4-PHOSPHATE CYTIDYLYLTRANSFERASE, CHLOROPLASTIC

3D Structure

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Related Domains

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Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupNucleotide-diphospho-sugar transferases(7516)

HH-groupNucleotide-diphospho-sugar transferases(7516.1)

TT-groupNucleotide-diphospho-sugar transferases(7516.1.1)

FFamilyIspD(7516.1.1.5)

Ligands

in contact, ≤ 4 Å

6-BENZYL-5-CHLORO-7-HYDROXYPYRAZOLO[1,5-A]PYRIMIDINE-3-CARBOXYLIC ACID30A
Cadmium ionCD
metal
COPPER (II) IONCU

Pfam Families

2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase

ClanCL0110GT-A

External Links

ECOD PDB View: 2YCM RCSB PDB: 2YCM PDBe: 2YCM UniProt: P69834

Downloads

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metal

Sodium ionNA

metal

Shown in the structure viewer. Drug annotations from DrugDomain.