ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ondB2 - ECOD Domain | ECOD

ECOD/Domains/e3ondB2

e3ondB2

UID: 000428057

PDB

Range: B:-2-237,B:403-485
PDB: 3OND chain B(all domains)
UniProt: Q9SP37 (all domains)
Gene: SAHH

Molecule: Adenosylhomocysteinase

3D Structure

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Related Domains

Browse other domains in AdoHcyase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupFormate/glycerate dehydrogenase catalytic domain-like(2003.1.11)

FFamilyAdoHcyase(2003.1.11.3)

Ligands

in contact, ≤ 4 Å

AdenosineADN
drugDrugBank DB00640
NadideNAD
drugDrugBank DB14128
Sodium ion

Pfam Families

PF05221AdoHcyase

S-adenosyl-L-homocysteine hydrolase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 3OND RCSB PDB: 3OND PDBe: 3OND UniProt: Q9SP37

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

+ 1 additive (2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL)

2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOLTRS

Shown in the structure viewer. Drug annotations from DrugDomain.