ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5VXU9_nD4 - ECOD Domain | ECOD

ECOD/Domains/Q5VXU9_nD4

Q5VXU9_nD4

UID: 004284511

RepresentativeAlphaFold

Range: 1031-1100
AlphaFold: AF-Q5VXU9
UniProt: Q5VXU9 (all domains)
Gene: SHOC1

Protein: Protein shortage in chiasmata 1 ortholog (EC 3.6.-.-) (Protein ZIP2 homolog) (MZIP2)

3D Structure

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Related Domains

Browse other domains in SHOC1_HhH_tandem →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHhH/H2TH(102)

HH-groupSAM/DNA-glycosylase(102.1)

TT-groupSAM domain-like(102.1.1)

FFamilySHOC1_HhH_tandem(102.1.1.125)

Pfam Families

PF29917SHOC1_HhH_tandem

SHOC1 helix-hairpin-helix tandem

ClanCL0198HHH

External Links

AlphaFold DB: Q5VXU9 UniProt: Q5VXU9

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1031-1100