ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3q3yB1 - ECOD Domain | ECOD

ECOD/Domains/e3q3yB1

e3q3yB1

UID: 000428545

PDB

Range: B:1-180
PDB: 3Q3Y chain B(all domains)
UniProt: Q5DSM6 (all domains)

Molecule: HEVB EV93 3C protease

3D Structure

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Related Domains

Browse other domains in Peptidase_C3 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel 2(1.1.17)

FFamilyPeptidase_C3(1.1.17.2)

Ligands

in contact, ≤ 4 Å

Hydrogenphosphate ionPI
ethyl (4R)-4-({(2S)-2-[3-{[(5-methyl-1,2-oxazol-3-yl)carbonyl]amino}-2-oxopyridin-1(2H)-yl]pent-4-ynoyl}amino)-5-[(3S)-2-oxopyrrolidin-3-yl]pentanoateXNV

+ 2 additives (1,2-ETHANEDIOL, Ammonium ion)

1,2-ETHANEDIOL

Pfam Families

PF00548Peptidase_C3

3C cysteine protease (picornain 3C)

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 3Q3Y RCSB PDB: 3Q3Y PDBe: 3Q3Y UniProt: Q5DSM6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Ammonium ionNH4

Shown in the structure viewer. Drug annotations from DrugDomain.