ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A1KPR5_nD1 - ECOD Domain | ECOD

ECOD/Domains/A1KPR5_nD1

A1KPR5_nD1

UID: 004286376

AlphaFold

Range: 56-140
AlphaFold: AF-A1KPR5
UniProt: A1KPR5 (all domains)

3D Structure

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Related Domains

Browse other domains in SpoU_sub_bind →

Classification

AArchitecturea+b three layers(a.12)

XX-groupBacillus chorismate mutase-like(301)

HH-groupL30e-like(301.1)

TT-groupL30e-like(301.1.1)

FFamilySpoU_sub_bind(301.1.1.5)

Pfam Families

PF08032SpoU_sub_bind

RNA 2'-O ribose methyltransferase substrate binding

ClanCL0101PELOTA

External Links

AlphaFold DB: A1KPR5 UniProt: A1KPR5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 56-140