ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

B5R7J1_nD1 - ECOD Domain | ECOD

ECOD/Domains/B5R7J1_nD1

B5R7J1_nD1

UID: 004290443

AlphaFold

Range: 1-65
AlphaFold: AF-B5R7J1
UniProt: B5R7J1 (all domains)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Rhomboid_N →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-lytic protease prodomain-like(327)

HH-groupRing-building motif II in type III secretion system(327.16)

TT-groupRing-building motif II in type III secretion system(327.16.1)

FFamilyRhomboid_N(327.16.1.7)

Pfam Families

PF12122Rhomboid_N

Cytoplasmic N-terminal domain of rhomboid serine protease

ClanCL0089GlnB-like

External Links

AlphaFold DB: B5R7J1 UniProt: B5R7J1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-65