ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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B5F8P0_nD1 - ECOD Domain | ECOD

ECOD/Domains/B5F8P0_nD1

B5F8P0_nD1

UID: 004293186

AlphaFold

Range: 1-65
AlphaFold: AF-B5F8P0
UniProt: B5F8P0 (all domains)

3D Structure

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Related Domains

Browse other domains in Rhomboid_N →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-lytic protease prodomain-like(327)

HH-groupRing-building motif II in type III secretion system(327.16)

TT-groupRing-building motif II in type III secretion system(327.16.1)

FFamilyRhomboid_N(327.16.1.7)

Pfam Families

PF12122Rhomboid_N

Cytoplasmic N-terminal domain of rhomboid serine protease

ClanCL0089GlnB-like

External Links

AlphaFold DB: B5F8P0 UniProt: B5F8P0

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-65