ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3tmqD1 - ECOD Domain | ECOD

ECOD/Domains/e3tmqD1

e3tmqD1

UID: 000429532

PDB

Range: D:1-281
PDB: 3TMQ chain D(all domains)
UniProt: Q3JP68 (all domains)
Gene: kdsA

Molecule: 2-dehydro-3-deoxyphosphooctonate aldolase 2

3D Structure

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Related Domains

Browse other domains in DAHP_synth_1 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyDAHP_synth_1(2002.1.1.35)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Nitrate, 1,2-ETHANEDIOL)

NitrateNO3
DrugBank DB14049
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00793DAHP_synth_1

DAHP synthetase I family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 3TMQ RCSB PDB: 3TMQ PDBe: 3TMQ UniProt: Q3JP68

Downloads

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