ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q6FF50_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q6FF50_nD2

Q6FF50_nD2

UID: 004301844

AlphaFold

Range: 81-245
AlphaFold: AF-Q6FF50
UniProt: Q6FF50 (all domains)
Gene: rlmB

Protein: 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB (EC 2.1.1.185) (23S rRNA (guanosine2251 2'-O)-methyltransferase) (23S rRNA Gm2251 2'-O-methyltransferase)

3D Structure

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Related Domains

Browse other domains in SpoU_methylase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupalpha/beta knot(2488)

HH-groupalpha/beta knot(2488.1)

TT-groupalpha/beta knot(2488.1.1)

FFamilySpoU_methylase(2488.1.1.1)

Pfam Families

PF00588SpoU_methylase

SpoU rRNA Methylase family

ClanCL0098SPOUT

External Links

AlphaFold DB: Q6FF50 UniProt: Q6FF50

Representative

This domain is classified based on similarity to:

Downloads

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Domain coordinates: residues 81-245