ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ayxC3 - ECOD Domain | ECOD

ECOD/Domains/e3ayxC3

e3ayxC3

UID: 000430747

PDB

Range: C:2-54,C:556-596
PDB: 3AYX chain C(all domains)
UniProt: F2Z6J6 (all domains)
Gene: hoxG

Molecule: Membrane-bound hydrogenase large subunit

3D Structure

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Related Domains

Browse other domains in NiFeSe_Hases, HoxH →

Classification

AArchitecturea+b two layers(a.11)

XX-groupFAD-linked reductases, C-terminal domain-like(244)

HH-groupNi-Fe binding domain in nickel-iron hydrogenase large subunit(244.4)

TT-groupNi-Fe binding domain in nickel-iron hydrogenase large subunit(244.4.1)

FFamilyNiFeSe_Hases, HoxH(244.4.1.3)

Ligands

in contact, ≤ 4 Å

Carbon monoxideCMO
drugDrugBank DB11588
Cyanide ionCYN
FE (II) IONFE2

Pfam Families

PF00374NiFeSe_Hases

Nickel-dependent hydrogenase

HoxL-like

External Links

ECOD PDB View: 3AYX RCSB PDB: 3AYX PDBe: 3AYX UniProt: F2Z6J6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

Magnesium ionMG

metal

NICKEL (II) IONNI

metal

Oxygen atomO

Shown in the structure viewer. Drug annotations from DrugDomain.