ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ayzC2 - ECOD Domain | ECOD

ECOD/Domains/e3ayzC2

e3ayzC2

UID: 000430770

PDB

Range: C:97-335,C:406-502
PDB: 3AYZ chain C(all domains)
UniProt: F2Z6J6 (all domains)
Gene: hoxG

Molecule: Membrane-bound hydrogenase large subunit

3D Structure

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Related Domains

Browse other domains in NiFeSe_Hases →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupalpha-helical domain in nickel-iron hydrogenase, large subunit(4025)

HH-groupalpha-helical domain in nickel-iron hydrogenase, large subunit(4025.1)

TT-groupalpha-helical domain in nickel-iron hydrogenase, large subunit(4025.1.1)

FFamilyNiFeSe_Hases(4025.1.1.2)

Ligands

in contact, ≤ 4 Å

FE3-S4 CLUSTERF3S
FE4-S3 CLUSTERF4S
within 5 Å only
FE4-S3 CLUSTERSF3

Pfam Families

PF00374NiFeSe_Hases

Nickel-dependent hydrogenase

External Links

ECOD PDB View: 3AYZ RCSB PDB: 3AYZ PDBe: 3AYZ UniProt: F2Z6J6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

within 5 Å only

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.