ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1v6vB1 - ECOD Domain | ECOD

ECOD/Domains/e1v6vB1

e1v6vB1

UID: 000043092

PDB

Range: B:808-936
PDB: 1V6V chain B(all domains)
UniProt: Q7SI98 (all domains)

Molecule: ENDO-1,4-BETA-D-XYLANASE

3D Structure

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Related Domains

Browse other domains in Ricin_B_lectin →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-Trefoil(6)

HH-groupbeta-Trefoil(6.1)

TT-groupbeta-Trefoil(6.1.1)

FFamilyRicin_B_lectin(6.1.1.4)

Ligands

in contact, ≤ 4 Å

beta-D-xylopyranoseXYP

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00652Ricin_B_lectin

Ricin-type beta-trefoil lectin domain

ClanCL0066Trefoil

External Links

ECOD PDB View: 1V6V RCSB PDB: 1V6V PDBe: 1V6V UniProt: Q7SI98

Downloads

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