ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q4FNF5_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q4FNF5_nD2

Q4FNF5_nD2

UID: 004318543

AlphaFold

Range: 186-300
AlphaFold: AF-Q4FNF5
UniProt: Q4FNF5 (all domains)
Gene: dapE

Protein: Succinyl-diaminopimelate desuccinylase (SDAP desuccinylase) (EC 3.5.1.18) (N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase)

3D Structure

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Related Domains

Browse other domains in M20_dimer →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupBacterial exopeptidase dimerisation domain(304.25)

TT-groupBacterial exopeptidase dimerisation domain(304.25.1)

FFamilyM20_dimer(304.25.1.1)

Pfam Families

PF07687M20_dimer

Peptidase dimerisation domain

External Links

AlphaFold DB: Q4FNF5 UniProt: Q4FNF5

Representative

This domain is classified based on similarity to:

Downloads

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Domain coordinates: residues 186-300