ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2xyqA1 - ECOD Domain | ECOD

ECOD/Domains/e2xyqA1

e2xyqA1

UID: 000431882

RepresentativePDB

Range: A:1-290
PDB: 2XYQ chain A(all domains)
UniProt: P0C6X7 (all domains)
Gene: rep

Molecule: PUTATIVE 2'-O-METHYL TRANSFERASE

3D Structure

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Related Domains

Browse other domains in CoV_Methyltr_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyCoV_Methyltr_2(2003.1.5.56)

Ligands

in contact, ≤ 4 Å

S-adenosyl-L-homocysteineSAH
drugDrugBank DB01752
Chloride ionCL
Magnesium ionMG

Pfam Families

PF06460CoV_Methyltr_2

Coronavirus 2'-O-methyltransferase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 2XYQ RCSB PDB: 2XYQ PDBe: 2XYQ UniProt: P0C6X7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

Sodium ionNA

metal

Shown in the structure viewer. Drug annotations from DrugDomain.