ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2y66A1 - ECOD Domain | ECOD

ECOD/Domains/e2y66A1

e2y66A1

UID: 000431884

PDB

Range: A:1-93
PDB: 2Y66 chain A(all domains)
UniProt: P14900 (all domains)
Gene: murD

Molecule: UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE

3D Structure

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Related Domains

Browse other domains in MurD-like_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupMurCD/PglD N-terminal domain-like(2003.1.8)

FFamilyMurD-like_N(2003.1.8.4)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
(2R)-2-[[3-[[3-[(Z)-(2,4-dioxo-1,3-thiazolidin-5-ylidene)methyl]phenoxy]methyl]phenyl]carbonylamino]pentanedioic acidN04
Sulfite ionSO3

Pfam Families

PF21799MurD-like_N

Mur ligase MurD-like, N-terminal domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 2Y66 RCSB PDB: 2Y66 PDBe: 2Y66 UniProt: P14900

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.