ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e2ybbd1 - ECOD Domain | ECOD

ECOD/Domains/e2ybbd1

e2ybbd1

UID: 000431920

PDB

Range: d:1-195
PDB: 2YBB chain d(all domains)
UniProt: P00125 (all domains)
Gene: CYC1

Molecule: CYTOCHROME C1, HEME PROTEIN, MITOCHONDRIAL

3D Structure

Loading viewer...

Related Domains

Browse other domains in Cytochrom_C1 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupCytochrome c-like(107)

HH-groupCytochrome c(107.1)

TT-groupCytochrome c(107.1.1)

FFamilyCytochrom_C1(107.1.1.2)

Ligands

in contact, ≤ 4 Å

Ferroheme CHEC
drugDrugBank DB03317

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02167Cytochrom_C1

Cytochrome C1 family

ClanCL0318Cytochrome-c

External Links

ECOD PDB View: 2YBB RCSB PDB: 2YBB PDBe: 2YBB UniProt: P00125

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure