ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3b03B1 - ECOD Domain | ECOD

ECOD/Domains/e3b03B1

e3b03B1

UID: 000432068

PDB

Range: B:4-367
PDB: 3B03 chain B(all domains)
UniProt: P61615 (all domains)
Gene: fni

Molecule: Isopentenyl-diphosphate delta-isomerase

3D Structure

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Related Domains

Browse other domains in FMN_dh →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyFMN_dh(2002.1.1.48)

Ligands

in contact, ≤ 4 Å

1-deoxy-1-[(4aR)-4a-[(2Z)-2-(2-{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)but-2-en-1-yl]-7,8-dimethyl-2,4-dioxo-3,4,4a,5-tetrahydrobenzo[g]pteridin-10(2H)-yl]-5-O-phosphono-D-ribitolVNR

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

FMN-dependent dehydrogenase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 3B03 RCSB PDB: 3B03 PDBe: 3B03 UniProt: P61615

Downloads

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