ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2exkB2 - ECOD Domain | ECOD

ECOD/Domains/e2exkB2

e2exkB2

UID: 000043358

PDB

Range: B:4-324
PDB: 2EXK chain B(all domains)
UniProt: Q09LX0 (all domains)
Gene: xynB3

Molecule: beta-D-xylosidase

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_43 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group5-bladed(5.1.2)

FFamilyGlyco_hydro_43(5.1.2.8)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, 2-(N-morpholino)ethanesulfonic acid)

GlycerinGOL
DrugBank DB09462
2-(N-morpholino)ethanesulfonic acidMES
DrugBank DB03814

Shown in the structure viewer.

Pfam Families

PF04616Glyco_hydro_43

Glycosyl hydrolases family 43

ClanCL0143B_Fructosidase

External Links

ECOD PDB View: 2EXK RCSB PDB: 2EXK PDBe: 2EXK UniProt: Q09LX0

Downloads

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Drug annotations from DrugDomain.