ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1y7bC2 - ECOD Domain | ECOD

ECOD/Domains/e1y7bC2

e1y7bC2

UID: 000043377

PDB

Range: C:4-324
PDB: 1Y7B chain C(all domains)
UniProt: Q97DM1 (all domains)
Gene: xynD

Molecule: Beta-xylosidase, family 43 glycosyl hydrolase

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_43 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group5-bladed(5.1.2)

FFamilyGlyco_hydro_43(5.1.2.8)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (HEPES, Glycerin)

HEPESEPE
DrugBank DB16872
GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF04616Glyco_hydro_43

Glycosyl hydrolases family 43

ClanCL0143B_Fructosidase

External Links

ECOD PDB View: 1Y7B RCSB PDB: 1Y7B PDBe: 1Y7B UniProt: Q97DM1

Downloads

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