ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ubeC1 - ECOD Domain | ECOD

ECOD/Domains/e3ubeC1

e3ubeC1

UID: 000433936

PDB

Range: C:11-325
PDB: 3UBE chain C(all domains)
UniProt: C3W5S1 (all domains)
Gene: HA

Molecule: Hemagglutinin HA1

3D Structure

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Related Domains

Browse other domains in Hemagglutinin →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupViral protein domain(10.5)

TT-groupViral protein domain(10.5.1)

FFamilyHemagglutinin(10.5.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
N-acetyl-alpha-neuraminic acidSIA
drugDrugBank DB03721within 5 Å only

Pfam Families

PF00509Hemagglutinin

Haemagglutinin

External Links

ECOD PDB View: 3UBE RCSB PDB: 3UBE PDBe: 3UBE UniProt: C3W5S1

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.