ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3sqgH2 - ECOD Domain | ECOD

ECOD/Domains/e3sqgH2

e3sqgH2

UID: 000434536

PDB

Range: H:3-183
PDB: 3SQG chain H(all domains)
UniProt: D1JBK2 (all domains)

Molecule: Methyl-coenzyme M reductase, beta subunit

3D Structure

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Related Domains

Browse other domains in MCR_beta_N →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupMethyl-coenzyme M reductase subunits(304.35)

TT-groupMethyl-coenzyme M reductase subunits(304.35.1)

FFamilyMCR_beta_N(304.35.1.3)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Sulfate ion, Pentaethylene glycol)

Sulfate ionSO4
DrugBank DB14546
Pentaethylene glycol1PE

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02783MCR_beta_N

Methyl-coenzyme M reductase beta subunit, N-terminal domain

ClanCL0618MCR

External Links

ECOD PDB View: 3SQG RCSB PDB: 3SQG PDBe: 3SQG UniProt: D1JBK2

Downloads

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