ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A2ALV5_nD2 - ECOD Domain | ECOD

ECOD/Domains/A2ALV5_nD2

A2ALV5_nD2

UID: 004352961

AlphaFold

Range: 776-895
AlphaFold: AF-A2ALV5
UniProt: A2ALV5 (all domains)
Gene: Shoc1

Protein: Protein shortage in chiasmata 1 ortholog (EC 3.6.-.-) (Protein ZIP2 homolog) (MZip2)

3D Structure

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Related Domains

Browse other domains in DUF5587 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyDUF5587(2004.1.1.700)

Pfam Families

PF17825SHOC1_ATPase

SHOC1 ATPase domain

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: A2ALV5 UniProt: A2ALV5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 776-895