ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q6M1A3_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q6M1A3_nD2

Q6M1A3_nD2

UID: 004355208

AlphaFold

Range: 136-345
AlphaFold: AF-Q6M1A3
UniProt: Q6M1A3 (all domains)
Gene: truD1

Protein: Probable tRNA pseudouridine synthase D 1 (EC 5.4.99.27) (tRNA pseudouridine(13) synthase) (tRNA pseudouridylate synthase D 1) (tRNA-uridine isomerase D 1)

3D Structure

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Related Domains

Browse other domains in TruD →

Classification

AArchitecturea+b two layers(a.11)

XX-grouptRNA pseudouridine synthase TruD insertion domain(1056)

HH-grouptRNA pseudouridine synthase TruD insertion domain(1056.1)

TT-grouptRNA pseudouridine synthase TruD insertion domain(1056.1.1)

FFamilyTruD(1056.1.1.1)

Pfam Families

tRNA pseudouridine synthase D (TruD)

ClanCL0649PseudoU_synth

External Links

AlphaFold DB: Q6M1A3 UniProt: Q6M1A3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 136-345