ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1ms1B2 - ECOD Domain | ECOD

ECOD/Domains/e1ms1B2

e1ms1B2

UID: 000043594

PDB

Range: B:1-399
PDB: 1MS1 chain B(all domains)
UniProt: Q26966 (all domains)

Molecule: trans-sialidase

3D Structure

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Related Domains

Browse other domains in BNR_3 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group6-bladed(5.1.3)

FFamilyBNR_3(5.1.3.28)

Ligands

in contact, ≤ 4 Å

2-deoxy-2,3-dehydro-N-acetylneuraminic acidDAN
drugDrugBank DB03991

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Pfam Families

BNR repeat-like domain

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 1MS1 RCSB PDB: 1MS1 PDBe: 1MS1 UniProt: Q26966

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.