ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3uptB3 - ECOD Domain | ECOD

ECOD/Domains/e3uptB3

e3uptB3

UID: 000436020

PDB

Range: B:22-351
PDB: 3UPT chain B(all domains)
UniProt: Q2SZA7 (all domains)
Gene: tkt

Molecule: Transketolase

3D Structure

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Related Domains

Browse other domains in Transketolase_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupThiamin diphosphate-binding fold (THDP-binding)(7574)

HH-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1)

TT-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1.1)

FFamilyTransketolase_N(7574.1.1.1)

Ligands

in contact, ≤ 4 Å

beta-D-Ribose-5-phosphateRP5
drugDrugBank DB04352
Bromide ionBR
Calcium ionCA

Pfam Families

PF00456Transketolase_N

Transketolase, thiamine diphosphate binding domain

ClanCL0254THDP-binding

External Links

ECOD PDB View: 3UPT RCSB PDB: 3UPT PDBe: 3UPT UniProt: Q2SZA7

Downloads

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metal

Thiamine diphosphateTPP

Shown in the structure viewer. Drug annotations from DrugDomain.