ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3rfeB1 - ECOD Domain | ECOD

ECOD/Domains/e3rfeB1

e3rfeB1

UID: 000436341

PDB

Range: B:1-118
PDB: 3RFE chain B(all domains)
UniProt: P13224 (all domains)
Gene: GP1BB

Molecule: Platelet glycoprotein Ib beta chain

3D Structure

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Related Domains

Browse other domains in LRRNT →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded right-handed beta-helix(207)

HH-groupLeucine-rich repeats(207.1)

TT-groupLeucine-rich repeats(207.1.1)

FFamilyLRRNT(207.1.1.7)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
Magnesium ionMG
metal

+ 1 additive (Sulfate ion)

Pfam Families

Leucine rich repeat N-terminal domain

External Links

ECOD PDB View: 3RFE RCSB PDB: 3RFE PDBe: 3RFE UniProt: P13224

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.