ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q87DB3_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q87DB3_nD3

Q87DB3_nD3

UID: 004365959

AlphaFold

Range: 566-629
AlphaFold: AF-Q87DB3
UniProt: Q87DB3 (all domains)

3D Structure

Loading viewer...

Related Domains

Browse other domains in GIDA_C →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHhH/H2TH(102)

HH-groupSAM/DNA-glycosylase(102.1)

TT-groupSAM domain-like(102.1.1)

FFamilyGIDA_C(102.1.1.26)

Pfam Families

PF13932SAM_GIDA_C

tRNA modifying enzyme MnmG/GidA C-terminal helical bundle

ClanCL0003SAM

External Links

AlphaFold DB: Q87DB3 UniProt: Q87DB3

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 566-629