ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3pzgA1 - ECOD Domain | ECOD

ECOD/Domains/e3pzgA1

e3pzgA1

UID: 000436861

PDB

Range: A:37-393
PDB: 3PZG chain A(all domains)
UniProt: A5IMX7 (all domains)
Gene: Tpet_1542

Molecule: Mannan endo-1,4-beta-mannosidase. Glycosyl Hydrolase family 5

3D Structure

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Related Domains

Browse other domains in GH5_mannosidase →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGH5_mannosidase(2002.1.1.254)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Glycerin, Phosphate ion, Tromethamine)

GlycerinGOL
DrugBank DB09462
Phosphate ionPO4
DrugBank DB14523
Tromethamine

Pfam Families

PF26410GH5_mannosidase

GH family 5 beta-mannosidase-like

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 3PZG RCSB PDB: 3PZG PDBe: 3PZG UniProt: A5IMX7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB03754

Shown in the structure viewer. Drug annotations from DrugDomain.