ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5FN28_nD4 - ECOD Domain | ECOD

ECOD/Domains/Q5FN28_nD4

Q5FN28_nD4

UID: 004380439

AlphaFold

Range: 531-730
AlphaFold: AF-Q5FN28
UniProt: Q5FN28 (all domains)
Gene: valS

Protein: Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)

3D Structure

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Related Domains

Browse other domains in Anticodon_1 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupAnticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases(140)

HH-groupAnticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases(140.1)

TT-groupAnticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases(140.1.1)

FFamilyAnticodon_1(140.1.1.5)

Pfam Families

PF08264Anticodon_1

Anticodon-binding domain of tRNA ligase

ClanCL0258DALR

External Links

AlphaFold DB: Q5FN28 UniProt: Q5FN28

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 531-730