ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q39YM4_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q39YM4_nD1

Q39YM4_nD1

UID: 004396471

AlphaFold

Range: 1-85
AlphaFold: AF-Q39YM4
UniProt: Q39YM4 (all domains)

3D Structure

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Related Domains

Browse other domains in Mur_ligase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupMurF and HprK N-domain-like(2493)

HH-groupMurF and HprK N-domain-like(2493.1)

TT-groupMurF and HprK N-domain-like(2493.1.1)

FFamilyMur_ligase(2493.1.1.1)

Pfam Families

PF01225Mur_ligase

Mur ligase family, catalytic domain

ClanCL0063NADP_Rossmann

External Links

AlphaFold DB: Q39YM4 UniProt: Q39YM4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-85