ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5F4C4_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5F4C4_nD1

Q5F4C4_nD1

UID: 004400716

AlphaFold

Range: 61-330
AlphaFold: AF-Q5F4C4
UniProt: Q5F4C4 (all domains)
Gene: SHOC2

Protein: Leucine-rich repeat protein SHOC-2 (Protein soc-2 homolog) (Protein sur-8 homolog)

3D Structure

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Related Domains

Browse other domains in LRR_1+LRR_8+LRR_14 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded right-handed beta-helix(207)

HH-groupLeucine-rich repeats(207.1)

TT-groupLeucine-rich repeats(207.1.1)

FFamilyLRR_1+LRR_8+LRR_14(207.1.1.102)

Pfam Families

Leucine Rich Repeat

ClanCL0022LRR

Leucine rich repeat

ClanCL0022LRR

Leucine-rich repeat region

ClanCL0022LRR

External Links

AlphaFold DB: Q5F4C4 UniProt: Q5F4C4

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 61-330