ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q6M1B4_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q6M1B4_nD1

Q6M1B4_nD1

UID: 004405339

AlphaFold

Range: 46-255
AlphaFold: AF-Q6M1B4
UniProt: Q6M1B4 (all domains)
Gene: MMP0002

Protein: UPF0425 pyridoxal phosphate-dependent protein MMP0002

3D Structure

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Related Domains

Browse other domains in SelA →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPLP-dependent transferases(7577)

HH-groupPLP-dependent transferases(7577.1)

TT-groupPLP-dependent transferases(7577.1.1)

FFamilySelA(7577.1.1.11)

Pfam Families

L-seryl-tRNA selenium transferase

ClanCL0061PLP_aminotran

External Links

AlphaFold DB: Q6M1B4 UniProt: Q6M1B4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 46-255