ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5F3X4_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q5F3X4_nD3

Q5F3X4_nD3

UID: 004421102

AlphaFold

Range: 581-660
AlphaFold: AF-Q5F3X4
UniProt: Q5F3X4 (all domains)
Gene: EFTUD2

Protein: 116 kDa U5 small nuclear ribonucleoprotein component (Elongation factor Tu GTP-binding domain protein 2) (U5 snRNP-specific protein, 116 kDa) (U5-116 kDa)

3D Structure

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Related Domains

Browse other domains in EFG_III →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupEF-G C-terminal domain-like(304.24)

TT-groupEF-G C-terminal domain-like(304.24.1)

FFamilyEFG_III(304.24.1.3)

Pfam Families

PF14492EFG_III

Elongation Factor G, domain III

ClanCL0437EF-G_C

External Links

AlphaFold DB: Q5F3X4 UniProt: Q5F3X4

Representative

This domain is classified based on similarity to:

Downloads

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Domain coordinates: residues 581-660